Scaffold Ga0211702_10000097

Overview

Basic Information

• Taxon OID: 3300020422
• Scaffold ID: Ga0211702_10000097
• Source Dataset Name: Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 23252
• Total Scaffold Genes: 43
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 15 (34.88%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 4

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_076
• Coordinates
  • Lat. (^o): -21.0073
  • Long. (^o): -35.3344
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006772	Metagenome	365	Y
F045677	Metagenome	152	N
F063605	Metagenome	129	Y
F075989	Metagenome	118	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211702_1000009715	F006772	N/A	MERLNKAIQLSTTGDLQRAAIFLEGAIEVRKGSRRQRTTARSAQATAWKKKVDDSITW
Ga0211702_1000009718	F045677	N/A	MKKVETLLPEELVESLSAEAKQKGVHRSDLIRERLMQPPNHLGLTTSDFHKAVTKVRRRSSYGLDRQQAESLVATVFNELFSPGHGD
Ga0211702_1000009727	F075989	N/A	MPIQESESKKIQRALDILKGVIAREEKRHMMDEHLSHSMRNLLESEIIPQLENELDFDPTPQYLWDDTGGEPPATLDEMHNAAYNSKYAKFPQFPGSMHYGSKDCK
Ga0211702_1000009729	F063605	N/A	MTIIRNEDPNELLGFELDPWPPLSDEEIEERERQAEFQDYLDSIPDVAERNRNLK