Scaffold Ga0211659_10231602

Overview

Basic Information

• Taxon OID: 3300020404
• Scaffold ID: Ga0211659_10231602
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 823
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_102
• Coordinates
  • Lat. (^o): -5.254
  • Long. (^o): -85.2248
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015933	Metagenome / Metatranscriptome	251	Y
F017127	Metagenome / Metatranscriptome	242	Y
F066151	Metagenome	127	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211659_102316021	F015933	N/A	MKTKENIEAGMYFSFKKTWKSYTKKIYNVEINDKGYMILNQYHCHSKTGEYIFVDLVIVRRIGENSLDYYKHDMFGKKTRGRIHYKDIDSFFYAKKAKDGKEYTHIEKCPIPGIQAIAV
Ga0211659_102316022	F066151	N/A	MSNEKQLVGWELVHFLMQRFNMTEDEALKNLAENIGNVELNK
Ga0211659_102316023	F017127	N/A	IMKKLEKKYDGVEINLRSFIKASRICAMGFDDCESMVAEQIIKA