Basic Information | |
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Taxon OID | 3300020398 Open in IMG/M |
Scaffold ID | Ga0211637_10142160 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 961 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_112 | |||||||
Coordinates | Lat. (o) | -23.1719 | Long. (o) | -129.6713 | Alt. (m) | Depth (m) | 696 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F021318 | Metagenome / Metatranscriptome | 219 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0211637_101421601 | F021318 | GAGG | MQAKINKREIDYKGQQLWLNPVDKTVYATDGAPTYSFSEVNGTPIYNYDSHFDAVKTAKDKLGTSYYHDAFVDPEFKSLAEDYVSDVKSGGRQRQAALRSNVNSAVDIVNVWETVLGKRDRVYAAKNLAKEVAVPNLLISIDTVTKFTGMEKLDEGMRARVKELPYTRATFTAAKYGLKFIIHEEARLKNVHNVLQDSIQVASTKIEQRQSFDVIDVVETNAGQAAIAPWDTFVSSTTQSTGDPTIDIGIASLNIEGTGVGGKMNRVGMHQLTYAKFTGNTYLRGVASIGPRDYSYEA |
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