Basic Information | |
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Taxon OID | 3300020394 Open in IMG/M |
Scaffold ID | Ga0211497_10000269 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 31091 |
Total Scaffold Genes | 44 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (11.36%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Bathycoccus sp. RCC1105 virus BpV | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_058 | |||||||
Coordinates | Lat. (o) | -17.5656 | Long. (o) | 42.1988 | Alt. (m) | Depth (m) | 66 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F033951 | Metagenome | 176 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0211497_1000026943 | F033951 | N/A | MNKLYILLACCCCSSSAGAGAFFGGFIPNTSQYVLKKMKKLIQIVIALDATPESCENLYKYIKEIKGTSAAESASHSLSEKERHILERVYDIGRMDVEPEKICDKSFMDSSIALFKNVQNAPEDEDVSVYCNNLKDLGNEDKRHPTYYWDESKKKFIRDGKYFSDAFGGRSGPELEGPVIAKCEAVGINIR |
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