Scaffold Ga0211666_10041277

Overview

Basic Information

• Taxon OID: 3300020392
• Scaffold ID: Ga0211666_10041277
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2017
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_100
• Coordinates
  • Lat. (^o): -12.9488
  • Long. (^o): -96.0293
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018190	Metagenome	236	N
F096202	Metagenome	105	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211666_100412774	F018190	N/A	MSKYDKGPETIQETIDRLQNYYNDPNNGINKCFIVQRIKELKQKQLQKNLEKQ
Ga0211666_100412776	F096202	N/A	MNINSENKQRIHDVLITDLQRRIFKQYNARTNEFLQTDEDY