Scaffold Ga0211683_10124597

Overview

Basic Information

• Taxon OID: 3300020372
• Scaffold ID: Ga0211683_10124597
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 831
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis antarctica (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_085
• Coordinates
  • Lat. (^o): -62.1363
  • Long. (^o): -49.3331
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F039593	Metagenome / Metatranscriptome	163	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211683_101245971	F039593	N/A	MAHEQQEFAAHSAWITGLRAQYAAMGSSGPQPSGFGGFGKPQLHEHLDERFNEALDIVDEPVYRSASAHLSWQPANDELDFDSDQPVYRSLGGLGSSTGGFAVDEVDVDMPGSHEAWMQSMPPLVQRQSAFSRL