Scaffold Ga0211505_1024164

Overview

Basic Information

• Taxon OID: 3300020352
• Scaffold ID: Ga0211505_1024164
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1558
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_067
• Coordinates
  • Lat. (^o): 32.1
  • Long. (^o): 17.7
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F095517	Metagenome / Metatranscriptome	105	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211505_10241642	F095517	N/A	MNGLMAIKKPPKGIYVLLVIWGAMIAYMGYTLFFTDVVEVDGEMSTSAANWEAENRDLLLAENSASENILINGKIINKGSNGEDYDTSGWYHVIYEGGLYVCEVYVDDEFDDRGEHVWTTCFTSINN