Scaffold Ga0211604_1082796

Overview

Basic Information

• Taxon OID: 3300020342
• Scaffold ID: Ga0211604_1082796
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556117-ERR599036)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 631
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_124
• Coordinates
  • Lat. (^o): -9.1552
  • Long. (^o): -140.5284
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F060813	Metagenome	132	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211604_10827962	F060813	AGGAGG	MKDKKYIVYTQANKLGLKGEFDNAKDAIKWAKENVYAFDYLKERKDTWEILFEELLVWIGKGEIIEC