Scaffold Ga0211569_1000210

Overview

Basic Information

• Taxon OID: 3300020331
• Scaffold ID: Ga0211569_1000210
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX555910-ERR599076)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 24598
• Total Scaffold Genes: 26
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 14 (53.85%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_137
• Coordinates
  • Lat. (^o): 14.1468
  • Long. (^o): -116.6821
  • Depth (m): 375

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025848	Metagenome	200	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211569_10002102	F025848	N/A	MGWKTRIEYWWFNYVHFPLWHRFGSKKSKEEVRKALHKRRKEGGCSSWRNYLKDHPEAAKHEWEKEFVREIEE