Scaffold Ga0211650_1002191

Overview

Basic Information

• Taxon OID: 3300020301
• Scaffold ID: Ga0211650_1002191
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX556086-ERR598997)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4641
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (57.14%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → environmental samples → uncultured Candidatus Poseidoniales archaeon (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_109
• Coordinates
  • Lat. (^o): 2.0596
  • Long. (^o): -84.553
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F078834	Metagenome	116	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211650_10021915	F078834	AGG	MLDLFLWFIAIVCLGIPSWLLYNSWNKSRLLNERLAQCDNTLLTDSSVKVTQIVSAPMGTTVTENAKLVVASTQSNTERVEPID