Scaffold Ga0211562_1074131

Overview

Basic Information

• Taxon OID: 3300020275
• Scaffold ID: Ga0211562_1074131
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX555991-ERR599175)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 722
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Zunongwangia → Zunongwangia profunda (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_138
• Coordinates
  • Lat. (^o): 6.3929
  • Long. (^o): -103.0691
  • Depth (m): 450

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011767	Metagenome / Metatranscriptome	287	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211562_10741312	F011767	AGG	MNTLIEKIGRFHSKVFEFLSRKAKTSKFWAILLTFAVLYEIIEHIVWPILVPYLMYMQWF