Scaffold Ga0211534_1071465

Overview

Basic Information

• Taxon OID: 3300020261
• Scaffold ID: Ga0211534_1071465
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556096-ERR598970)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 565
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Bathycoccus sp. RCC716 virus 3 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_064
• Coordinates
  • Lat. (^o): -29.5023
  • Long. (^o): 37.9965
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065458	Metagenome / Metatranscriptome	127	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211534_10714652	F065458	N/A	FCLEEIRFYTEKINEIINEGLKDPKTYYENSKSEWKKIYQMIPIMYLMNQVEKEDKK