Scaffold Ga0211701_1008639

Overview

Basic Information

• Taxon OID: 3300020242
• Scaffold ID: Ga0211701_1008639
• Source Dataset Name: Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555995-ERR599010)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 798
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_076
• Coordinates
  • Lat. (^o): -21.0073
  • Long. (^o): -35.3344
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001993	Metagenome / Metatranscriptome	607	Y
F004453	Metagenome	437	Y
F014388	Metagenome / Metatranscriptome	263	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211701_10086391	F004453	N/A	MLIDFTEYELETIANAMEDYIQYDDEKLDTESLFGGLSVADRVTSINNKIDSILYK
Ga0211701_10086392	F014388	AGGAG	MSSLHHENILEDCFEVAMESFRINNKLTHEQLDELITISKGTYDAICSNAYKLFQDRCI
Ga0211701_10086393	F001993	N/A	MGILSLTSEQLRYKMKHLNELCPNRSVTNDDEFYELYSKLRDLIEDTNYNIDIVDLYTALHCAMEDFEMYA