Basic Information | |
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Taxon OID | 3300020202 Open in IMG/M |
Scaffold ID | Ga0196964_10019246 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2821 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (71.43%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Sand → Desert → Soil → Systems Level Insights Into Methane Cycling In Arid And Semi-Arid Ecosystems |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: California | |||||||
Coordinates | Lat. (o) | 33.3049 | Long. (o) | -116.2547 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F037286 | Metagenome / Metatranscriptome | 168 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0196964_100192462 | F037286 | GGA | MNFRIRKGTHVSHFHEKCPRWPSENFYEQDKPLWWGNLCEECSKLADIDAVQREKRSRSANG |
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