Scaffold Ga0181361

Basic Information
Taxon OID	3300019783 Open in IMG/M
Scaffold ID	Ga0181361_101727 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1568
Total Scaffold Genes	4 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	4

Taxonomy
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake → Freshwater Lake Microbial Communities From The Great Lakes, Usa, Analyzing Microbial Food Webs And Carbon Cycling

Source Dataset Sampling Location
Location Name	USA: Michigan
Coordinates	Lat. (^o)	43.1998	Long. (^o)	-86.5698	Alt. (m)	Depth (m)	5
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F005775	Metagenome	390	N
F016114	Metagenome / Metatranscriptome	249	Y
F078633	Metagenome / Metatranscriptome	116	N
F094995	Metagenome / Metatranscriptome	105	N

Family

Category

Number of Sequences

3D Structure?

Metagenome

390

Metagenome / Metatranscriptome

249

Metagenome / Metatranscriptome

116

Metagenome / Metatranscriptome

105

Protein ID	Family	RBS	Sequence
Ga0181361_1017271	F078633	N/A	TDSYQDRVCVIPPDRLNAQHVFGIYIPVMRHTWQPDLKREWWAALQSKNTMLGPTFEASAHPDDVERFAAFATWIGDLLRNPEKFT
Ga0181361_1017272	F016114	N/A	MHIKYWAAAFFDSRDIETINEMAANARRMLICQRELQRDELLRLKMKYPHLTTKD
Ga0181361_1017273	F005775	N/A	MAKQRPIYTKAQHQIVTPAFVEKKIQLHKSIKWTTKDDRELFIMASGSVTRYVPKSEHNSQAPMGFFNLQMGHYNKISIHTRDFAQLADVFEQITLFLKNNAGKLDQVVTKELDTYTTHHLKNLLNTNEPR
Ga0181361_1017274	F094995	N/A	MQLKEKYTTLQRTLDCMQTQIEESLSFARNFVPRGETPRSLFALLKQHTTYRNDPPGVELLQSMPTLMHNNYYGIPGAGDCDCFCIAAVASCKVENIPVRIVIVGNTEKNPTHVYCEVLDNGRWTAFDLCSPFYGETKKYRYLSR

Protein ID

Family

RBS

Sequence

Ga0181361_1017271

N/A

TDSYQDRVCVIPPDRLNAQHVFGIYIPVMRHTWQPDLKREWWAALQSKNTMLGPTFEASAHPDDVERFAAFATWIGDLLRNPEKFT

Ga0181361_1017272

N/A

MHIKYWAAAFFDSRDIETINEMAANARRMLICQRELQRDELLRLKMKYPHLTTKD

Ga0181361_1017273

N/A

MAKQRPIYTKAQHQIVTPAFVEKKIQLHKSIKWTTKDDRELFIMASGSVTRYVPKSEHNSQAPMGFFNLQMGHYNKISIHTRDFAQLADVFEQITLFLKNNAGKLDQVVTKELDTYTTHHLKNLLNTNEPR

Ga0181361_1017274

N/A

MQLKEKYTTLQRTLDCMQTQIEESLSFARNFVPRGETPRSLFALLKQHTTYRNDPPGVELLQSMPTLMHNNYYGIPGAGDCDCFCIAAVASCKVENIPVRIVIVGNTEKNPTHVYCEVLDNGRWTAFDLCSPFYGETKKYRYLSR

NMPFamsDB