Basic Information | |
---|---|
Taxon OID | 3300019745 Open in IMG/M |
Scaffold ID | Ga0194002_1013493 Open in IMG/M |
Source Dataset Name | Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_8-9_MG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 1035 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Margulisbacteria → Candidatus Marinamargulisbacteria → unclassified Candidatus Marinamargulisbacteria → Candidatus Marinamargulisbacteria bacterium SCGC AAA071-K20 | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment → Microbial Communities From Sediments And Microbial Mats In Various Locations |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | USA: Delaware | |||||||
Coordinates | Lat. (o) | 38.7906 | Long. (o) | -75.1638 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F083386 | Metagenome | 113 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0194002_10134931 | F083386 | AGGAG | MPISRMQQERQNYGLGSWVKKQTKKVTKPFTKVAKKIVPKEIAGIMRAAAPFLPAGYREAAYLL |
⦗Top⦘ |