Scaffold Ga0167663_1006433

Overview

Basic Information

• Taxon OID: 3300015202
• Scaffold ID: Ga0167663_1006433
• Source Dataset Name: Arctic sediment microbial communities from supraglacial cryoconite, Storglaci?ren, Tarfala, Sweden (Sample st-12a, ablation zone cryoconite)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Bristol
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 6841
• Total Scaffold Genes: 9
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (66.67%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils

Source Dataset Sampling Location

• Location Name: Storglaci?ren, Tarfala, Sweden
• Coordinates
  • Lat. (^o): 67.901457
  • Long. (^o): 18.580979
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F010345	Metagenome / Metatranscriptome	305	Y
F066047	Metagenome / Metatranscriptome	127	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0167663_10064337	F010345	GGAG	MGLLARFLSYSQQTYGGAPLLLIVMLVQLALLGWVVAARLRGRIDRNSGSAEERRLKSAARAEIWNKRVRPMALTMMLLGPGIGLGMSTLLGALGMGSLSDAMASPTGAEHLAQTMAIAYRDISYAYFLMVGGTFPMLLGPVIVLAAHGLEEEGMEARGGDPDEVLLHTMKTLLSVSQTQAVQAQRDAAKTHALLEQLVSSLSRRSAA*
Ga0167663_10064338	F066047	AGGAG	MRAAKGGGFEEIEALIYRLFAEKQFALALLALVMVAQLLSAQFLLLRLHPPDSQAAPAPLAKDRVDVRCDAAGARTMKGELLGDSARGKTVVVHLGAADEMCLSQVTSAGVSELVVGLSADAADR*