Basic Information | |
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Taxon OID | 3300015193 Open in IMG/M |
Scaffold ID | Ga0167668_1000628 Open in IMG/M |
Source Dataset Name | Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Bristol |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 6764 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils |
Source Dataset Sampling Location | ||||||||
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Location Name | Rabots glacier, Tarfala, Sweden | |||||||
Coordinates | Lat. (o) | 67.872223 | Long. (o) | 16.713705 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001752 | Metagenome / Metatranscriptome | 642 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0167668_10006283 | F001752 | AGG | MGLSSAFAFVVYIIQPTKIVLTAVTSIKRERWRTPGDFMIRFVSRVLLSAAFIAVAVAAHAQAPWRQVYKDSDVAVIFDTASIVLQSPGTWTTVTSWDYTRPRILENKKQYTRLVERAYVRCSPVRVKRVRSTVYAGNNVLVRDEGEVDPRDQAHMVWDRPKPATPGRNAFESMCGILTRKAGINAISPPSTKAAEAAVKATPKKTRAIKKTTKG* |
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