Scaffold Ga0169850_100166

Overview

Basic Information

• Taxon OID: 3300014922
• Scaffold ID: Ga0169850_100166
• Source Dataset Name: Human fecal microbial communities from infant at 4 months in Denmark - 626_4M
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 68318
• Total Scaffold Genes: 86
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 18 (20.93%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated → Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark

Source Dataset Sampling Location

• Location Name: Denmark
• Coordinates
  • Lat. (^o): 55.678
  • Long. (^o): 12.531

Associated Families

Family	Category	Number of Sequences	3D Structure?
F060985	Metagenome / Metatranscriptome	132	N
F089054	Metagenome	109	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0169850_10016641	F060985	N/A	MIKVEKAKNNFTIEMRIFENYEKVKYEIIKVIDFLRHAETNLGMCRIFDNQNHELWHSVIKPWFQPERFGITYLWFHSGFSHIGYGEYHIIRTNRWLKTPIERINREDYIFGYWFPTYKKYIPYRIRILKLALKDLERIKEEYGKD*
Ga0169850_10016648	F089054	N/A	MLTKGKFLVSFEVPGHTKEYTEGFTEEMVIPYRTEELNPYLRYPNQEINNNHLHSEHIRLQIREMLQIPLRDITIIDIISLP*