Scaffold Ga0119946_1024726

Overview

Basic Information

• Taxon OID: 3300014801
• Scaffold ID: Ga0119946_1024726
• Source Dataset Name: Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Nanjing University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 620
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment System In Nanjing, China

Source Dataset Sampling Location

• Location Name: China: Nanjing
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015472	Metagenome	254	Y
F033432	Metagenome	177	Y
F039133	Metagenome	164	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0119946_10247261	F039133	N/A	TIAMNTTDKVIVKFKSRVPKMLYTAHYNGLLLGSGSNAQDLGEYYACKYNTEWILQADNRFYTQGGVVK*
Ga0119946_10247262	F015472	AGGAGG	MQTFYLNNGGTRWYSAGKIRVTGEFKGKSYDRMRQPMFWEQLGNFAVCYVKVGNTVFCGFTNDDNGTIQLKLEKCRVVR*
Ga0119946_10247263	F033432	AGG	MSEYRKKFLSLWSAIMTEERWHKFESQACIPSCKGWNAWAPLCECGKNYCTFKPFGKL