Scaffold Ga0119946

Basic Information
Taxon OID	3300014801 Open in IMG/M
Scaffold ID	Ga0119946_1001571 Open in IMG/M
Source Dataset Name	Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Nanjing University
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300014801 Open in IMG/M

Scaffold ID

Ga0119946_1001571 Open in IMG/M

Source Dataset Name

Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Nanjing University

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	3121
Total Scaffold Genes	9 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (44.44%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (40.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

3121

Total Scaffold Genes

9 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

4 (44.44%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (40.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment System In Nanjing, China

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment System In Nanjing, China

Source Dataset Sampling Location
Location Name	China: Nanjing
Coordinates	Lat. (^o)	Long. (^o)	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

China: Nanjing

Coordinates

Lat. (^o)

Long. (^o)

Alt. (m)

Depth (m)

Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F031764	Metagenome / Metatranscriptome	181	Y
F034567	Metagenome / Metatranscriptome	174	Y
F054858	Metagenome	139	N
F058818	Metagenome / Metatranscriptome	134	N
F082590	Metagenome / Metatranscriptome	113	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0119946_10015711	F058818	N/A	MIKELKEKQNLLSEIAAELYGDLWIMNEKFWGSPTEKELREVTMQLIDLGVTVEPTEEQEELAKKIAKKFGFELEDED*
Ga0119946_10015712	F034567	N/A	MFNYYDYVNHYGNRMFAIAGVKAMPARFSSILFTGTYEECMQRLNPVGLEGSFEDFQNKVAIPK*
Ga0119946_10015713	F082590	AGGAGG	MLTVPRFSDTITEEQYEKLTRLPYERKPDHPDEIRSSINFSELHESIREIVARLPVVEFPNSFFDYFLSGEQQFYLVTYKERVYLVDTQGYDYARYVVQLKDLVVMEKEKPAETMLMKAHPGSVETIVDMLRHMEVDGETMEFILKQVGMEEQMLRQLFLKSDNATLFGLALQKENV*
Ga0119946_10015715	F031764	N/A	MQNTHIQTAIQKVSTSFPSLFSREDVIKLLMDLSADMQDEAPKPKIDLDTLITTFRQVLSEKDWDNVVDKDEIELSMGYDNKVEVDRVTIDEDFLIGEAVDALEAVYNALDEEAN*
Ga0119946_10015718	F054858	GAGG	LLLRTDVRILRYNKGKKVMNKKEQRIAITRAFKAKLIESQGEDFSFIEDDAVLLFDYKKDGKVFKDLEYFRGMNEVFNPVGQWAEGHGDNTEHDAYEKIVDMLNEELEEIRAKVEEQAMFEKINKGLGLAK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0119946_1001571

Overview

Ecosystem & Geography

Associated Families

Sequences