Basic Information | |
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Taxon OID | 3300013941 Open in IMG/M |
Scaffold ID | Ga0117792_1000083 Open in IMG/M |
Source Dataset Name | Epidermal mucus viral and microbial communities from European eel in Spain - water from Alfacada pond (Ebro delta) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Valencia |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 9091 |
Total Scaffold Genes | 29 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 17 (58.62%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus | (Source: IMG/M) |
Source Dataset Ecosystem |
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Host-Associated → Fish → Skin → Epidermal Mucus → Unclassified → Epidermal Mucus → Epidermal Mucus Viral And Microbial Communities From European Eel In Spain |
Source Dataset Sampling Location | ||||||||
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Location Name | Spain: Alfacada pond | |||||||
Coordinates | Lat. (o) | 40.647955 | Long. (o) | -0.738702 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F034753 | Metagenome | 174 | Y |
F037191 | Metagenome / Metatranscriptome | 168 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0117792_100008329 | F034753 | GAG | MKSLVTNLAEKYKQQTSYWSGSLFEEVVNFSTDYKGKYGEELFRDILLNCTDIPVQWDEDSNTSNDDGVYDLFWYLHDGKKIRVEVKTSGRTVSKGVAKGWQHENVYFGDNKWDKLVFLDYDSNDVLYITIVNYDDVVTGDAIDLSIFGKKAHCRKNEEGKAKVDFSTKSIANGIAKGATFKYDFNNPDDDLLGFFLLSKLA* |
Ga0117792_10000835 | F037191 | AGGAGG | MTVTEWIEKLKEFPQDQEVRITDGHNYHFYEGDFEFQLFEDVDGSTFVDIGIGGFEEKE* |
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