Scaffold Ga0120181_1002036

Overview

Basic Information

• Taxon OID: 3300013766
• Scaffold ID: Ga0120181_1002036
• Source Dataset Name: Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Tennessee
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 7899
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (50.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost → Permafrost Microbial Communities From Nunavut, Canada To Study Carbon Cycling

Source Dataset Sampling Location

• Location Name: Canada: Axel Heiberg Island, Nunavut
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F051997	Metagenome / Metatranscriptome	143	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0120181_10020366	F051997	N/A	MNMGSRTGLEAEAINRLTDDVQPPVMRAILVQCLAGDIASSAAISRMLAEGPVSTVRAAIDDVTQRAATISRASDMLVHDRVDELTQVFVENV