Basic Information | |
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Taxon OID | 3300013285 Open in IMG/M |
Scaffold ID | Ga0136642_1030069 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1549 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From High-Altitude Lakes In Yosemite National Park, California, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Lower Cathedral Lake, Yosemite National Park, California, USA | |||||||
Coordinates | Lat. (o) | 37.8453 | Long. (o) | -119.4233 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F029367 | Metagenome | 188 | N |
Protein ID | Family | RBS | Sequence |
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Ga0136642_10300693 | F029367 | AGGAG | MKKEHSDFDCMVCEHPDAQGVDLECYFEPNTFNLWFVYVGDALITDLLRDTVIQSLERGYDIACRAEAEESKLSAALDRYESKHYEV* |
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