Scaffold Ga0172421_112482

Overview

Basic Information

• Taxon OID: 3300013212
• Scaffold ID: Ga0172421_112482
• Source Dataset Name: Freshwater microbial communities from Saiful Muluk Lake, Pakistan
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: BGI Tech Solutions Co., Ltd.
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5086
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (87.50%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Saiful Muluk Lake, Pakistan

Source Dataset Sampling Location

• Location Name: Saiful Muluk Lake, Naran, Pakistan
• Coordinates
  • Lat. (^o): 34.8762
  • Long. (^o): 73.6934

Associated Families

Family	Category	Number of Sequences	3D Structure?
F031872	Metagenome / Metatranscriptome	181	N
F033435	Metagenome / Metatranscriptome	177	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0172421_1124823	F031872	GGA	MVESLVVDEWIYDTLTADATLQGLLAVDNRSPSYQQGIYLYFAPEKDPISLRQPQVPYIVVRHLDAGQTDTTSMCGGRIVTTSSHQVWCWDTQSGAVSMARIKGIVDRIDTLLNQQSVNTTTPVFFLNRSSVSSSIDVSQDGRVDNGIVQLYTATITP*
Ga0172421_1124825	F033435	GGAG	LSTSIFDNIPKLEGRPNYSVDIERFIGAPGAFVFREPKASDLFPRPEVEKMLKIAFPEFPAQMLQILMIMARCYVTQPGDGEINPARRFAQLARDRSDIYLYVVGQFAAAFPINIEEAVDEVPND*