Scaffold Ga0171665_1242000

Overview

Basic Information

• Taxon OID: 3300013124
• Scaffold ID: Ga0171665_1242000
• Source Dataset Name: Petroleum sludge microbial communities from waste storage tank in Noonmati IOCL oil refinery, Guwahati, Assam, India - point GR3 91
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Life Technologies
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 508
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Built Environment → Oil Refinery → Petroleum Sludge → Unclassified → Petroleum Sludge → Petroleum Sludge Microbial Communities From Waste Storage Tank In Noonmati Iocl Oil Refinery, Guwahati, Assam, India

Source Dataset Sampling Location

• Location Name: Guwahati, Assam, India
• Coordinates
  • Lat. (^o): 26.18471
  • Long. (^o): 91.80725

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025938	Metagenome / Metatranscriptome	199	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0171665_12420001	F025938	N/A	MVVIPDKIVDLLSSMFEDVRDKQFIIGDTLIEIVNATGDKSGTIAYLAGRLGVAASTLYDYYRIAKLWTPEYRAMYQALDWTIYRNADPNDPEDRALLDRCIDEQWSSATFKENKYPALKDPRVIVGRMIALGKRIYEQDTLEMSRSFSENHVLVKGNNFIISDI