Basic Information | |
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Taxon OID | 3300012981 Open in IMG/M |
Scaffold ID | Ga0168316_103125 Open in IMG/M |
Source Dataset Name | Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DT8 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Minnesota - Twin Cities |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4100 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (20.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings → Weathered Mine Tailings Microbial Communities From Hibbing, Minnesota, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Hibbing, MN, USA | |||||||
Coordinates | Lat. (o) | 47.432362 | Long. (o) | -92.940835 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F027031 | Metagenome | 196 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0168316_1031252 | F027031 | N/A | MSPAASSVQRWRTLVLVYPVLDARYGSGLPRKRARRVMAREEREVVLGVVERLPSTVLDWSAGLATLEPLDIIEVRRPVTSLSSSGGGRWWVGPREVRPELGEIAGSGARYDSVYALWPADPDVPQCGWGCSQGPSDATIGAGFSSISTDHWRSLATDPDPEQGYVHEWLHQVEGLYRGLGLDQEALPSLHDAALFTSTRPVDEPPFGKSYAEYESRSRTWSPWYRDYMTGRLRPAGPAPKKLLDTPVGLTPERWALRR* |
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