Scaffold Ga0154020

Basic Information
Taxon OID	3300012956 Open in IMG/M
Scaffold ID	Ga0154020_10075116 Open in IMG/M
Source Dataset Name	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300012956 Open in IMG/M

Scaffold ID

Ga0154020_10075116 Open in IMG/M

Source Dataset Name

Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

DOE Joint Genome Institute (JGI)

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	3399
Total Scaffold Genes	6 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (33.33%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (25.00%)
Associated Families	4

Scaffold Components

Scaffold Length (bps)

3399

Total Scaffold Genes

6 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

2 (33.33%)

Novel Protein Genes

4 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

1 (25.00%)

Associated Families

Taxonomy
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	(Source: UniRef50)

Taxonomy

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15

(Source: UniRef50)

Source Dataset Ecosystem
Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Source Dataset Ecosystem

Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Source Dataset Sampling Location
Location Name	Austria: Klosterneuburg
Coordinates	Lat. (^o)	48.3	Long. (^o)	16.2	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Austria: Klosterneuburg

Coordinates

Lat. (^o)

48.3

Long. (^o)

16.2

Alt. (m)

Depth (m)

Location on Map

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Family	Category	Number of Sequences	3D Structure?
F037652	Metagenome / Metatranscriptome	167	N
F057234	Metagenome	136	N
F064316	Metagenome	128	N
F080330	Metagenome	115	N

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0154020_100751162	F080330	AGGA	VKRFACFIFTCFTALTLWAGDPFAGSGASPYGAALADGARLSTRLVENVYLMPEQITKLIFPKPVDEVSVNTQVINVGRNPADSKEYYLLLSPRVASADVNMHLVMDGRTYSFRLIVGKEKVNYRKTYTVEGGGSSRNLSKVPPLAPTEINTTRLINLINQIRRDPNYATIVAKDMGFSPQGVTYLWNGAEVTLQAAWHYYPQDVVILQIEVHNPTSEAVYLSATQVEPFIANTSFPYLLTQQGTKVLLPGQTDIKYVFLQGHALDIENARFELRLPASKTQLKEIPAPDAAP*
Ga0154020_100751163	F037652	N/A	MIPYPHFWSEEPEARRRAWRPTDEVRRRLIRWWTIQGLLLAGIIVIGILVARESKRMPQIYAGLPNGVVFETSAGPLQLDRVARIELVNDVLQILYYQEGNLNYLDAVRENVKPQLLAQFRAEMESAAKQTNSTVYLNVAETFEVLRVPAKGFEAVTKANLIKRSSRESTGAPVYIRTRWLLEGSRYRLARVEEIKPGDYYELFLAEKGRLKKLSKQELERELAVRKNQEIPLPKRSPLF
Ga0154020_100751164	F064316	N/A	MLGDTKEEAALEVNDPKAVKPAKKVGALKMLLRQFEATGNPPLQGAEVLPPKLIGDGNYHWYPLAWLRWLAQWERIKTFILVVNLIGLAVVYGSIRQRSSYEVKLPEPATELLLKSKGFDTFNQNQVESFLTFVVNAANEASSEGMPMLNLLEGSIEPAIYLRLQQKGQKTANVPLTEYPIYTLYITEVTRWRYNPATRIISACIKGFRMSNTLSGKGGMEPYRAQVEIFWEPMSNRNKWGYYLQRFDEFYGAAAEAYDTELKNRDRSGF*
Ga0154020_100751165	F057234	N/A	MERVEFTLDGPPLVVPVRGCILLVRFRLIGHQEMDSVFCDYGTLSGRALQLFNCRTKTFLIHATVPCDYALKVGIMTLPAEQVGEVFQLPTPPWYHRLEEDALALARQSQHLAVEVGLVDLFTATAGSKQ*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0154020_10075116

Overview

Ecosystem & Geography

Associated Families

Sequences