Scaffold Ga0157210

Basic Information
Taxon OID	3300012665 Open in IMG/M
Scaffold ID	Ga0157210_1003964 Open in IMG/M
Source Dataset Name	Freshwater microbial communities from Talbot River, Ontario, Canada - S11
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Molecular Research LP (MR DNA)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	3260
Total Scaffold Genes	12 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	3 (25.00%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	4

Taxonomy
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada

Source Dataset Sampling Location
Location Name	Douro-Dummer, Ontario
Coordinates	Lat. (^o)	44.4982	Long. (^o)	-79.1546	Alt. (m)	Depth (m)
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000957	Metagenome / Metatranscriptome	821	Y
F003714	Metagenome / Metatranscriptome	472	Y
F005588	Metagenome / Metatranscriptome	395	Y
F010765	Metagenome / Metatranscriptome	299	Y

Family

Category

Number of Sequences

3D Structure?

Metagenome / Metatranscriptome

821

Metagenome / Metatranscriptome

472

Metagenome / Metatranscriptome

395

Metagenome / Metatranscriptome

299

Protein ID	Family	RBS	Sequence
Ga0157210_100396410	F010765	N/A	MSALPTPPQPDDLPVALRDIVFGVMIGAIAWLVRYLCSTDKHSLGYILRRTATAGLASLLVGVATKGYFSSEGVAFAAAGCAGYASPELVDLLLAKIKAMRVKPPAKGD*
Ga0157210_10039645	F000957	N/A	MSSFQHLEGMRNLLLEIYEVNERIMTGDICSAKAAIASTNVKKILAHYHEALHEDGATKVSLQAYVAAGGWVGIQFSYELDGFEVAGSQVPRRV*
Ga0157210_10039647	F005588	N/A	MITIRPNSKPPFWWLFPWAYARTLHMSANALKAYADKADRDILHQKAVIANLQADIGLLRQRIADQNDAIIRGTAITPDAKPYTE*
Ga0157210_10039648	F003714	N/A	MPNAHHPYVESVTFAGRPIPLKRPMAAFSARRLQAILPQIAALNAAGKSQGDAAEALGTTVGTLRTWLDITNTTWVNLKRRGPYNINRNA*

Protein ID

Family

RBS

Sequence

Ga0157210_100396410

N/A

MSALPTPPQPDDLPVALRDIVFGVMIGAIAWLVRYLCSTDKHSLGYILRRTATAGLASLLVGVATKGYFSSEGVAFAAAGCAGYASPELVDLLLAKIKAMRVKPPAKGD*

Ga0157210_10039645

N/A

MSSFQHLEGMRNLLLEIYEVNERIMTGDICSAKAAIASTNVKKILAHYHEALHEDGATKVSLQAYVAAGGWVGIQFSYELDGFEVAGSQVPRRV*

Ga0157210_10039647

N/A

MITIRPNSKPPFWWLFPWAYARTLHMSANALKAYADKADRDILHQKAVIANLQADIGLLRQRIADQNDAIIRGTAITPDAKPYTE*

Ga0157210_10039648

N/A

MPNAHHPYVESVTFAGRPIPLKRPMAAFSARRLQAILPQIAALNAAGKSQGDAAEALGTTVGTLRTWLDITNTTWVNLKRRGPYNINRNA*

NMPFamsDB