Scaffold Ga0119867_1088136

Overview

Basic Information

• Taxon OID: 3300012018
• Scaffold ID: Ga0119867_1088136
• Source Dataset Name: Activated sludge microbial communities from Shanghai, China - membrane bioreactor - Activated sludge (MBR)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Tongji University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 837
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Communities From Shanghai, China

Source Dataset Sampling Location

• Location Name: China: Quyang, Shanghai
• Coordinates
  • Lat. (^o): 31.3
  • Long. (^o): 121.5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F080163	Metagenome	115	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0119867_10881361	F080163	N/A	SIDFRINQRNIRYFYEAMQNFENSLVDEFKEKKNNFCSANQFLESISDFDKIIFVIITYMKSYFDFCKDYSKISLYVHLVQFDFTTSVLIQGFYNYSHRDLSFSTKLESKVLDSEIELLQEKLDLIREEICELIGVDPNLEKQGHEDNYVFNLNIESDNQIGFFLQETEL*