Scaffold Ga0119931_1015086

Overview

Basic Information

• Taxon OID: 3300011984
• Scaffold ID: Ga0119931_1015086
• Source Dataset Name: Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Hong Kong
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 864
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant → Freshwater Microbial Communities From Drinking Water Treatment Plant - The University Of Hong Kong

Source Dataset Sampling Location

• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013839	Metagenome / Metatranscriptome	268	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0119931_10150861	F013839	N/A	VFTVISSSSTNKQPCLIDRPFLRGARITNATPTCDPINPSLGSLIQLVRVGDLPSEDGALVEDITIVSNEDYPDNSGIRTADIGLYVYMPNQAAPSTSSALMIGRFEVGLSGSTFGYPLGIQLPAVMAPVPRTGDTNLIGPIQIGKN