Scaffold Ga0153700

Basic Information
Taxon OID	3300011339 Open in IMG/M
Scaffold ID	Ga0153700_10475 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Hannam
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Scaffold Components
Scaffold Length (bps)	19808
Total Scaffold Genes	27 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	6 (22.22%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (75.00%)
Associated Families	4

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Seoul, South Korea
Coordinates	Lat. (^o)	37.5254611	Long. (^o)	127.0168945	Alt. (m)	Depth (m)
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002018	Metagenome / Metatranscriptome	603	Y
F015976	Metagenome / Metatranscriptome	250	Y
F054038	Metagenome / Metatranscriptome	140	Y
F088546	Metagenome	109	N

Family

Category

Number of Sequences

3D Structure?

Metagenome / Metatranscriptome

603

Metagenome / Metatranscriptome

250

Metagenome / Metatranscriptome

140

Metagenome

109

Protein ID	Family	RBS	Sequence
Ga0153700_1047514	F054038	AGG	MAYKNDGTFNVLYKTRNKIAKTLKRIIAEEALIDTEALYDSIRINAKIPALGELEIQILAMYYFGYLNNGTENMLSFDLCAKLTQRLNAEGTTAEIYAQYTEWMAKRYPILQVARILGEKKSIIYTFEPIGGDFNWPLKFRGFK*
Ga0153700_1047518	F002018	AGG	MTSYQALINEIETFYNNHIQVKKVGSDFQEQMFNFATKDEKYPIVFIVPVSALATENTNDFVLDIYCFDIIQKDRANINVILSDCQQILYDLFTYFINSTNYDFDFVDTPTFTPLNNDLLDYAAGWVMSATFCVNNWTDCAVPLKQAD*
Ga0153700_104752	F015976	AGG	MKKLILILSLILAIFATSCSANYHIRRAIKKGFSVGESADTIRISTIDSIPYVLRDSIYWEKVIVQKDTIVRYKRLEVPKTRFETRIEYKLKRDTIKMLQKVEVVKWKTERNKKTKANLWLFIIGFGMGFITNWLLKFSKYPL*
Ga0153700_1047525	F088546	N/A	MKIKEEYKGKTIITYDSVLGERRIEVDKIDPKRFIYYTTIGLGYLFESERQVIDYTGIDQEIMQADAIEEPKPVVKRTRKRRKDATAN*

Protein ID

Family

RBS

Sequence

Ga0153700_1047514

AGG

MAYKNDGTFNVLYKTRNKIAKTLKRIIAEEALIDTEALYDSIRINAKIPALGELEIQILAMYYFGYLNNGTENMLSFDLCAKLTQRLNAEGTTAEIYAQYTEWMAKRYPILQVARILGEKKSIIYTFEPIGGDFNWPLKFRGFK*

Ga0153700_1047518

AGG

MTSYQALINEIETFYNNHIQVKKVGSDFQEQMFNFATKDEKYPIVFIVPVSALATENTNDFVLDIYCFDIIQKDRANINVILSDCQQILYDLFTYFINSTNYDFDFVDTPTFTPLNNDLLDYAAGWVMSATFCVNNWTDCAVPLKQAD*

Ga0153700_104752

AGG

MKKLILILSLILAIFATSCSANYHIRRAIKKGFSVGESADTIRISTIDSIPYVLRDSIYWEKVIVQKDTIVRYKRLEVPKTRFETRIEYKLKRDTIKMLQKVEVVKWKTERNKKTKANLWLFIIGFGMGFITNWLLKFSKYPL*

Ga0153700_1047525

N/A

MKIKEEYKGKTIITYDSVLGERRIEVDKIDPKRFIYYTTIGLGYLFESERQVIDYTGIDQEIMQADAIEEPKPVVKRTRKRRKDATAN*

NMPFamsDB