Scaffold Ga0153699_1015

Overview

Basic Information

• Taxon OID: 3300011338
• Scaffold ID: Ga0153699_1015
• Source Dataset Name: Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Haengju
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 59066
• Total Scaffold Genes: 97
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (10.31%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location

• Location Name: Seoul, South Korea
• Coordinates
  • Lat. (^o): 37.5955556
  • Long. (^o): 126.817072

Associated Families

Family	Category	Number of Sequences	3D Structure?
F061599	Metagenome / Metatranscriptome	131	Y
F063465	Metagenome	129	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0153699_101564	F063465	N/A	MEDLKLDQKLTANQLYKQYKDEGGTLSFSAWLNREKTKGVFPLNEEISKDIVSTLDKIKKKDMNRTILGFPKTTLYIVGGVIVLAIVASQIMKKK*
Ga0153699_101569	F061599	N/A	MPSNVNIYSYTASANPYFVKSLAHKYGYTFDRDQSLSSVLQQLVSMEGEAVLMEIVENNPDKDLFMEYYEKKYAKKQEERKEDSKLLEYMNFTGQIQAARQTADNKRLTSETSIMVLAGAILIAFAIISKK*