Scaffold Ga0153698

Basic Information
Taxon OID	3300011335 Open in IMG/M
Scaffold ID	Ga0153698_1153 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011335 Open in IMG/M

Scaffold ID

Ga0153698_1153 Open in IMG/M

Source Dataset Name

Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	32195
Total Scaffold Genes	50 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (8.00%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (20.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

32195

Total Scaffold Genes

50 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

4 (8.00%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

1 (20.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Hwacheon, Gangwon-do, South Korea
Coordinates	Lat. (^o)	38.0874861	Long. (^o)	127.761456	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Hwacheon, Gangwon-do, South Korea

Coordinates

Lat. (^o)

38.0874861

Long. (^o)

127.761456

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003127	Metagenome / Metatranscriptome	506	Y
F004474	Metagenome / Metatranscriptome	436	Y
F010620	Metagenome	301	Y
F010918	Metagenome / Metatranscriptome	297	Y
F085715	Metagenome	111	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0153698_115312	F010918	N/A	MKRYKVTYNYFESGKKRIAIRILEAYDKEHALQLMSMWPKLILKVETL*
Ga0153698_115325	F085715	N/A	MFWDKDAYAIAKKLTNNHELHRDLVSFVFILLHKYELESNVLPKMFARFAWNQWNWKESAFNKEMRFPSNELGEIIQDESEDVPNKYQNLINTFLSTRPKDDQELFIKEVTKMHLYGMTYREIRDNTGICLDTIHKTIKKFKYDLYNYSGGDCEVVANL*
Ga0153698_115342	F003127	GAG	MIAGYNDRTCTNGKGGIKSVLLFPLGAMSGAVITANEVTALTVAGETFLYKLKSNLSSYTAPIKVDKNNGTLWYEHSLSMILASDNKELRSEIHLLAQNEVVCLVENADGTIVALGFGEGLQIADANEYTSGVLKSDRRGHVIVLNGMENDEVPDVDPLVYAALLLQQSPVI*
Ga0153698_115346	F004474	N/A	MNYLLSVENLKKLGLIHSNTDTKILAVAIKRSQDIQLQPALSTPLFKALLLRVQNNTWTQNYLDLMNDYVVPCLVAFVDYRCALLLNEKLTNKSVGRVQDENIQPNSDSETSALRDQLRKDAYFYKERLIVHLMADNGVKYPEYIETSSSPGHCSEDMTKDRNGYTPINFII*
Ga0153698_11535	F010620	N/A	MRKLIAFLSVLTMFGCSSERMAQYHYKKALKHGLKLVQDSDTIRIATVDSVAYYINDSIYFEKVIRYRDSIVFFKNVYIPKTKWQTRIEYRYKTQLVKQDVLKYKYIYKDSKNKKAKSNWNLFLWGFISGVGLFFLLRLFDKLRRIV*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0153698_1153

Overview

Ecosystem & Geography

Associated Families

Sequences