Scaffold Ga0151657_1076351

Overview

Basic Information

• Taxon OID: 3300011247
• Scaffold ID: Ga0151657_1076351
• Source Dataset Name: Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_3, 0.02
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Toyama Prefectural University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 541
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → unclassified viruses → Circular genetic element sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Environmental Dna From Seawater And Marine Sediment

Source Dataset Sampling Location

• Location Name: Japan Sea near Toyama Prefecture, JAPAN
• Coordinates
  • Lat. (^o): 37.1316
  • Long. (^o): 137.71844

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005580	Metagenome	396	Y
F057768	Metagenome	136	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0151657_10763511	F005580	N/A	SNMKKSIPHPSITGMASGLAIAAYLNAGKPTTTATGTSLGNVTVMTDGVIKDITDGQLGAAFNTLSGNAINMIASDAGRKTLVTAGGIAALGAFARRQFPQLKLGGSKLYFRI*
Ga0151657_10763512	F057768	N/A	MATTITRTIDATPTDKAYFSLTDNMLSSSLGNIQVPQGSSRISRVDCAFDTTNAKGYQVVCRLLG