Basic Information | |
---|---|
Taxon OID | 3300011190 Open in IMG/M |
Scaffold ID | Ga0126327_10192357 Open in IMG/M |
Source Dataset Name | Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-30 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 983 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms → Marine Gutless Worms Symbiont Microbial Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Hawaii, USA | |||||||
Coordinates | Lat. (o) | 21.2704 | Long. (o) | -157.7748 | Alt. (m) | Depth (m) | 1 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F015059 | Metagenome | 257 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0126327_101923571 | F015059 | N/A | MSDGEPVMGVTSLGEEIYLLGWKDSDRDEVEVYNVISYRLLRCLTVPNSRGFIDMTSCASLLCLYISDKDVKCIHRLDLHGNAEQWPVSDPPARLSVNANHNLIVTCREVGKIKEISPRGELLRDVILPDDVTNPWHAIQLTSGQFIVCHGSTFSNDRVHRVCKISSDGRHVVQSHGGQTGSDTGQYDVPAHLAVDDNEFVFVVDCGNRRVTLLSPTLEFVRQVVSRDQLKWLPDRQCLDVQRRRLYVTDNKWDRDKKQLTAGRVVVFSV* |
⦗Top⦘ |