Scaffold Ga0151514

Basic Information
Taxon OID	3300011115 Open in IMG/M
Scaffold ID	Ga0151514_10520 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011115 Open in IMG/M

Scaffold ID

Ga0151514_10520 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	16636
Total Scaffold Genes	22 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	9 (40.91%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (40.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

16636

Total Scaffold Genes

22 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

9 (40.91%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (40.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F022372	Metagenome / Metatranscriptome	214	Y
F050981	Metagenome / Metatranscriptome	144	N
F081037	Metagenome	114	N
F083886	Metagenome / Metatranscriptome	112	N
F100656	Metagenome / Metatranscriptome	102	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0151514_105202	F050981	GGAG	MRWLAIILLSASSVCAQITDEELSKISKEEIILTIRHLRALTADAIATADRAIASEARVQASLTDATAALMDSQNQLLKVDQDIRNLQAHAEEQTRIAVGAKDDAVKAQRLADHRGNLLGWLGAGLLCIVCLRLTSILPPPYGFLLPVAAIPAGYWLARLLL*
Ga0151514_105203	F100656	AGCAG	MTTLKNSLILLSLIALSACETPCPKPAPAVVSVAKAKVSTAAASEAVHSAIEDSKGTVVHIEKIRNAQERVDAKSILILKWLEFQR*
Ga0151514_105204	F083886	N/A	MLRNEIFGDLWRGAVGVAGSGLAVISSVHEDIDSMVKTAGMILGCLASLAMFISLCQRIWHNWQTRKWEGVIFKQTDDDLKK*
Ga0151514_105205	F022372	N/A	MSTTITIDVAFLTTEQRDSATLLFARSGGWQATVDGEPNPVSAEDYGVTMIANYLRSGVASQSAYDAQIVAAQEVAELLEGVTVTTPADFPTPPIVTPV*
Ga0151514_105209	F081037	N/A	MAIQTDKIPEVIDRNGIYVVKGHTMETLCKLARRKWDFNPADFFTQEDDKRFAIRIRTDRPAPSFPYTMRSTLKGSDDPYNPVAPLALSLPNLDTWQRDRQPKDINGVVTDGVLITSWIRIYISGSGSGTFTQTVFGRQEIKDLYGMTYYIGPEVIIESDTTSGSGSAGGGI*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151514_10520

Overview

Ecosystem & Geography

Associated Families

Sequences