Scaffold Ga0151515

Basic Information
Taxon OID	3300011114 Open in IMG/M
Scaffold ID	Ga0151515_10971 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011114 Open in IMG/M

Scaffold ID

Ga0151515_10971 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	11106
Total Scaffold Genes	15 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	10 (66.67%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	4 (80.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

11106

Total Scaffold Genes

15 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

10 (66.67%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

4 (80.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

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Family	Category	Number of Sequences	3D Structure?
F003378	Metagenome / Metatranscriptome	490	Y
F006986	Metagenome	360	Y
F041650	Metagenome	159	N
F077020	Metagenome	117	N
F078386	Metagenome	116	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0151515_109711	F078386	GGA	MRILTAIMATITAIATSLGIAYAAQAPAPPAWQYSSPQPISADRLEPPAETIVYAHGDCSWVPAMALKAGWTSDQIPQLIQIILRESGCCPNRAGGDIVDEDCNITGHDGSTHSSDTSLLQINGLNYNPKRNPFAPICLQMKICTQEPLFDPLTNLKAGRLLYDYWEKAAGDGWIPWNICNKTSTCKASTKVRP*
Ga0151515_1097110	F041650	GAGG	MREDIQLSFVECQMPRTPYQLERFVVGQHDTPEMQFVQVCREIEALYYTIKEVGMSNKKTELEIAKLRATGDEIDAIDADIKELGLERTRLVAIGARRELDCLIEIYDSMPHFTRQQIDESQPDYWQARLSRQANLQAMAGGAGWAHLEALDQIGVLQPMIQAQQDRAKELQK*
Ga0151515_1097113	F077020	GAGG	MAQTMKWGQAYSVLIDIGEVANGFVLDTDKLDNTVNVLDGTTNFVDATEYVLAVSIKRGRGSQIDNMQVGVCQVQFDDRQSGRLFDPANTASSWYAGTYGLAPRRNFKVFAGTAEMFVGKMTDIDLQYNMPNQSFCSIVAADGLYELARTTLLGFTPSSELTSSRVSTILDRAEVAYSTALRNIETGVATCGTVSYADNDNVLTALQNVAVAEDGRLYANRKNEISFDARIFSTFSTAVANFGGTAGTSIPVQEISVAYGQETLFNRVSIGVDGFGTAQVVSDAASQTQYGVQSFSYDNLPLVSLAAGSALAVNLLARYKDPKFRFDSISTSLNACGSAQFATLTTLDVGDVVSVTKTYSTGLPLSRTDNMYIESISHDITPQDHRIRLGLGQANVITNFILDTSTLDSTAFGLG*
Ga0151515_109712	F006986	N/A	MSAVLVIWHDAHSGSESWVNIKDLDKDPAIVETVGFILPTADGGKPGHITLFQSRTEDALDHVLHIPHGMIQRIVAIPTPTD*
Ga0151515_109716	F003378	AGGAG	MEPTVKIKQNSTIAKFLDLGQRLLSLFLANALPAITTGAVIGISVSKSAIMAGAMAVIKVVSALAEASVDGELTTEEIKEAFSGAKKK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151515_10971

Overview

Ecosystem & Geography

Associated Families

Sequences