Scaffold Ga0151517

Basic Information
Taxon OID	3300011113 Open in IMG/M
Scaffold ID	Ga0151517_1021 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Sep
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011113 Open in IMG/M

Scaffold ID

Ga0151517_1021 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Sep

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	86924
Total Scaffold Genes	124 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	73 (58.87%)
Novel Protein Genes	7 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (42.86%)
Associated Families	7

Scaffold Components

Scaffold Length (bps)

86924

Total Scaffold Genes

124 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

73 (58.87%)

Novel Protein Genes

7 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (42.86%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011824	Metagenome	286	Y
F017828	Metagenome	238	Y
F038692	Metagenome / Metatranscriptome	165	Y
F068392	Metagenome	124	Y
F102491	Metagenome / Metatranscriptome	101	Y
F102498	Metagenome	101	N
F102519	Metagenome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0151517_1021121	F102498	AGGAG	MSKQIQYAGYSIVKDGTWKFRTATDEKRIYQLEAFGESVYMVSIRPVDSKGAAAKELLAMDYMGKDPECVAFFVKHARDENPFKPKKARTVKVKVSKSDPVESYFLAVEADQPVSRKEAARLRAEFNERVRIAYEAN*
Ga0151517_102125	F102519	N/A	MKKILIAVCVVLLNGCALLDAYLMAPYDANEYLQITEIRVMAGQYRQQCDNFQASAGNAQDITRRTMTFERYSEFIPRNENGYRAAKALNEIAQGINTAYGKGIVSATFCRLKYNNIEHAAELIQRVTAGRPRK*
Ga0151517_102126	F017828	N/A	VKKTKWLCFLIMLAGAIVVSLQLHPILGIELLFVGNAAWLVTAVVSKDWPSAANFAMLAAVWLLGIVKYYTV*
Ga0151517_10217	F038692	AGGA	MRAREFVTENASAGATGSGSIATVAQPLGGVIRRNGGSFFSGKYMNSADPYPNTPAYMKKGKKSRAR*
Ga0151517_102171	F011824	N/A	MSVSTYRSEQPLFTVIMRDADARNMLTRWSQTSRSIQARVEDNRMHLFDHNTLSLFMVTWTHGWDHVVIWDPWSKRHINI*
Ga0151517_102172	F068392	N/A	MLEDLKVDQAIRLAILNLCVVLHECGITEVHVGGLMRILGVPDDHAQAHDDERLIIDDNFIKYVEQINQPRSADQILH*
Ga0151517_102185	F102491	GGAGG	VQVVSWHDWLERHIPYYEKEKQQHRYYLNPPATVLVVDPVDRNRRVGLRGFAWSTWEAMDADIRALRYRAEPIFLDNDTHQRWYWVFWDANEALMAVMRLS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151517_1021

Overview

Ecosystem & Geography

Associated Families

Sequences