Basic Information | |
---|---|
Taxon OID | 3300011076 Open in IMG/M |
Scaffold ID | Ga0138574_1013420 Open in IMG/M |
Source Dataset Name | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 631 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4 | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil → Peatlands Soil Microbial Communities From Germany And Austria, That Are Sulfate Reducing |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Germany: Weissenstadt | |||||||
Coordinates | Lat. (o) | 50.13 | Long. (o) | 11.88 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F019793 | Metagenome / Metatranscriptome | 227 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0138574_10134201 | F019793 | AGGAGG | MSSKIRNVALLLPAFVLATGLASAQSSVKVSTVGSDGSVSSTTLTGTPNGPGAKAPTPAADGSAKYWDGLGLGGASTNYFSQVPYLIAPPNPQIATGPDDILTIVNRTISRYPNPNAAGNTGTLNPYNYPPTEYVPLDVWMGLTVLGTQAGGGALC |
⦗Top⦘ |