Scaffold Ga0139175_142388

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0139175_142388

Scaffold Ga0139175_142388

Overview

Basic Information
Taxon OID	3300010946 Open in IMG/M
Scaffold ID	Ga0139175_142388 Open in IMG/M
Source Dataset Name	Wastewater viral communities and vesicles from water purifying plant in Alicante,Spain - replicate C1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Autonomous University of Barcelona
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	532
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Viral Communities And Vesicles From Water Purifying Plant In Alicante,Spain

Source Dataset Sampling Location
Location Name	Alicante,Spain
Coordinates	Lat. (^o)	38.34	Long. (^o)	-0.48	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F027486	Metagenome	194	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0139175_1423882	F027486	GGA	MTRDKNKVCRSFRQDFPEFVSRAEALGVRISLGEGRRNGRERVFWLDGYRQLTGYTTKSDGSPFRHEDAVRNIDKALTAIEDDRKIMAGLTIAERFARVLAEFREMKPQARMIGEVRLPGGDGGHCFFMADYEGGVHLHGFGQDVARGKA

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