Scaffold Ga0138501_110730

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0138501_110730

Scaffold Ga0138501_110730

Overview

Basic Information
Taxon OID	3300010944 Open in IMG/M
Scaffold ID	Ga0138501_110730 Open in IMG/M
Source Dataset Name	Wastewater viral communities and vesicles from water purifying plant in Alicante,Spain - replicate Ab1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Autonomous University of Barcelona
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1076
Total Scaffold Genes	5 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (80.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → Viruses → Predicted Viral	(Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Viral Communities And Vesicles From Water Purifying Plant In Alicante,Spain

Source Dataset Sampling Location
Location Name	Alicante,Spain
Coordinates	Lat. (^o)	38.34	Long. (^o)	-0.48	Alt. (m)		Depth (m)
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001629	Metagenome	660	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0138501_1107302	F001629	GGAG	MILNQGKMAGGLVDELLEVVHRYDGSLYMSTVIGCLELVKQQLIMESVEPEEDEA*

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