Scaffold Ga0138502_102949

Overview

Basic Information

• Taxon OID: 3300010943
• Scaffold ID: Ga0138502_102949
• Source Dataset Name: Wastewater viral communities and vesicles from water purifying plant in Alicante,Spain - replicate Ab2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Autonomous University of Barcelona
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2124
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Viral Communities And Vesicles From Water Purifying Plant In Alicante,Spain

Source Dataset Sampling Location

• Location Name: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.34
  • Long. (^o): -0.48

Associated Families

Family	Category	Number of Sequences	3D Structure?
F051872	Metagenome / Metatranscriptome	143	N
F054846	Metagenome / Metatranscriptome	139	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0138502_1029493	F054846	AGGAG	MSNELDLNDLGLGDNSRAGVNDKPARRGAEGRGQGRESRKSLSEHDTARKPERVPMYQQRTMIDTTLIPEGFHGHWVSNNPAGRIDMLLRAGYDFVTKDQNVYSSHVTENGVDSRVSKSGSDGVTLYLMIIPLELYEADQEAKAEKAKEQTATIFGKQRNDPDFFSRDEFGRDTPASRGIGRVTTNDFVL*
Ga0138502_1029494	F051872	N/A	TADKAKALGWNPDKDEFEAKTGKEWSTAGQYLRQREMADEIHKRGQELKQLRRDMERRLKNVEQPIANIAQNEHKQRLDNVSLSLKQAAIDQDFDAIDALLAERDRLMKAEPVAKQEEPLAIDDTNDDGETQEQLQAAAQKWIAENPWYNKLTQAGRDQAAKLEAEYRAKVDCTTEEALAYVAQEMGKDPIVAVLKGKLKSPDVTPRTAERRRVASASESSLDPASRNIYNKMISQGLLKTAAEKSAFIKDALGA*