Basic Information | |
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Taxon OID | 3300010937 Open in IMG/M |
Scaffold ID | Ga0137776_1190159 Open in IMG/M |
Source Dataset Name | Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Minnesota - Twin Cities |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1401 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment → Dco-Ecs Fumarole Sampling, Azores 2015 |
Source Dataset Sampling Location | ||||||||
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Location Name | Furnas, Sao Miguel | |||||||
Coordinates | Lat. (o) | 37.772747 | Long. (o) | -25.304072 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F026768 | Metagenome | 196 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0137776_11901593 | F026768 | GAGG | LVLRVVGGHNAGMAPAQDFKRALTRVIEPAGGPGVELATLEDAARFIALLKPWLQARLHWDFAAERLLKAAETGKWQDVESATAQMEFALRVEGWL* |
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