Basic Information | |
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Taxon OID | 3300010352 Open in IMG/M |
Scaffold ID | Ga0116247_10019842 Open in IMG/M |
Source Dataset Name | AD_JPHWca |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 7323 |
Total Scaffold Genes | 9 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (22.22%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge → Active Sludge Microbial Communities Of Municipal Wastewater-Treating Anaerobic Digesters From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Japan | |||||||
Coordinates | Lat. (o) | 35.92 | Long. (o) | 139.63 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F034443 | Metagenome | 174 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0116247_100198421 | F034443 | N/A | EKLVSNLFFYKYGDEKNKFETSFSSLYDRFGIVSCGNLGTDKDKITPRLFWVGTTGGYGYPVELRGLADGSNLSLRYTGSHGIFNLFWKDWVDWIMNTRKSVKIEKQMDFIELKNIDFTKRYRMNGINYLVSEISVTLNKSSIKSAQLKCFSCP* |
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