Scaffold Ga0074045_10459975

Overview

Basic Information

• Taxon OID: 3300010341
• Scaffold ID: Ga0074045_10459975
• Source Dataset Name: Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 821
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil → Bog Forest Soil Microbial Communities From Calvert Island, British Columbia, Canada

Source Dataset Sampling Location

• Location Name: Calvert Island, British Columbia, Canada
• Coordinates
  • Lat. (^o): 51.62
  • Long. (^o): -128.09

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006757	Metagenome / Metatranscriptome	365	Y
F044385	Metagenome	154	Y
F098478	Metagenome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0074045_104599751	F006757	N/A	PPIKGKVRMALLNLTIFQEISTDELITMAQALPGGTKVRIADRLTAIVLLLGTRPVDLD*
Ga0074045_104599752	F044385	AGGAG	MLIRNNDGEIVGEMNVSITQEGTVIRTNTMYQNGRPITRNISIRDTQGGVRTTNVIGGKILP*
Ga0074045_104599753	F098478	N/A	DVKKAAAGDKSEPNGNGKAETAKEVKIQTLTPANTKLVKRGFVKMFVDFVVKRGSVTTDDLAAEFAGRQVEGKKITKQRVLRYAHWCVNKGVLKAK*