Basic Information | |
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Taxon OID | 3300010298 Open in IMG/M |
Scaffold ID | Ga0126325_10246751 Open in IMG/M |
Source Dataset Name | Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-14 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 866 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms → Marine Gutless Worms Symbiont Microbial Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Hawaii, USA | |||||||
Coordinates | Lat. (o) | 21.2608 | Long. (o) | -157.7866 | Alt. (m) | Depth (m) | 1 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F015059 | Metagenome | 257 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0126325_102467511 | F015059 | N/A | MSDGEPVWGVTSLGEEIYLLRAKDSGRDEVEVYDVISYRLLRCLTVPNARAFTDMTSCANLLCLYISDPWVKCVHRLDLYGNAEQWPVSDKPAFLSVNANHNLIVTCIEVGKIKEFSPRGELLRHVILPDDVTNPWHAIQLTSGQLIVCHGSTVRNDRVHGVCKISSDGRHVVQSHGGQPGSDTGQYKGPAHLAVDDNEFVFVVDCNNRRVTLLSPTLEYVRQVVSRDQ |
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