Scaffold Ga0131853_10129597

Overview

Basic Information

• Taxon OID: 3300010162
• Scaffold ID: Ga0131853_10129597
• Source Dataset Name: Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3494
• Total Scaffold Genes: 17
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 16 (94.12%)
• Novel Protein Genes: 15
• Novel Protein Genes with Ribosome Binding Sites (RBS): 15 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: Petit - Saut dam, French Guiana
• Coordinates
  • Lat. (^o): 5.0626
  • Long. (^o): -53.0462

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005225	Metagenome	407	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0131853_1012959710	F005225	GAG	MVSVYVMCVMVMQCVVQYTEKCYFISICNVCNGDAVYGTV*
Ga0131853_1012959711	F005225	GAG	MVSVYIMCVMVMECTVQYREMCYGISICNVCDGDGVYGTV*
Ga0131853_1012959712	F005225	GAG	MVSVYVMCVMVMEFTVQYREMCYGISICNVCNGDAVYGTV*
Ga0131853_1012959713	F005225	GAG	MVSVYVMCVMVMQCTVQYREMCYDISICNVCNGDGVYGTV*
Ga0131853_1012959714	F005225	GAG	MISVYVMCVMVMEFTVQYREMCYGISICNVCNGDGVYGTV*
Ga0131853_1012959715	F005225	GAG	MVSVYVMCVMVMECMVQYREMCCGISICNVCNGDGVYGTV*
Ga0131853_1012959716	F005225	GAG	VALVYVMCVMVMECTVLYREMYYGISICNVCNGDGVYSTV*
Ga0131853_1012959717	F005225	GAG	MVSVYVMCVMVMEFTVQYREMCYGISICNVCNGDGVYGTV*
Ga0131853_101295972	F005225	GAG	MVSVYVMRVMVMECTVKYREMCYGISICNACNGDGVYCTV*
Ga0131853_101295973	F005225	GAG	MVSVYVMRVMVMECTVQYREMCYGISICNVCNGDGVYCTV*
Ga0131853_101295975	F005225	GAG	MVSVYVMCVMVMECMVQYREMCYSISICNVCNGDGVYGTV*
Ga0131853_101295976	F005225	GAG	MVSVYVMRVMVMECTVQLREMCYGISICNVCNGDGVYGTV*
Ga0131853_101295977	F005225	GAG	MVSVYVMCVMVMECTVQYREMCYGISICNVCNGDGLYGTV*
Ga0131853_101295978	F005225	GAG	MVSVYVMCVMVMDCMVQYREMCYGISICNVCNGDGVYGTV*
Ga0131853_101295979	F005225	GAG	MVSVYVMCVMVMECTVQYREMCYGMSICNACNGDGVYGTV*