Scaffold Ga0133736_1429679

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0133736_1429679

Scaffold Ga0133736_1429679

Overview

Basic Information
Taxon OID	3300009966 Open in IMG/M
Scaffold ID	Ga0133736_1429679 Open in IMG/M
Source Dataset Name	Termite gut microbial communities. Combined Assembly of Gp0151149, Gp0151152, Gp0151222, Gp0151223
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Luxembourg, Luxembourg Institute of Science and Technology
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1222
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (66.67%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → Viruses → Predicted Viral	(Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut → Multi-Omic Termite Study

Source Dataset Sampling Location
Location Name	France
Coordinates	Lat. (^o)	48.913957	Long. (^o)	2.485499	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F049065	Metagenome	147	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0133736_14296792	F049065	GAGG	MGHPPPNHDVGRVMASLHPRNVFLHLMGRLSINLIVLVVVLLLDGEDFLIHEEDVFIPVLGMSLEETLCSCPSDLLHSRSKEVSLRVPVHVDCP*

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