Scaffold Ga0131077_10590988

Overview

Basic Information

• Taxon OID: 3300009873
• Scaffold ID: Ga0131077_10590988
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1006
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Tai Wan
• Coordinates
  • Lat. (^o): 24.0
  • Long. (^o): 120.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F035819	Metagenome	171	Y
F069035	Metagenome	124	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0131077_105909882	F035819	GGAGG	VTTRQEPRTARKREPKRAIARTISEPGNGSHDSRLCLIGVKVDAALRREIDAYAEAHGVSRSRAAGHYLAIAKETIHEREGVPAGRADELMEAVDGLRAAVDILGPPTFGMLRLLAHWASQGGTVKVSEDELLAELRSVGADEWEQAVAEAERDLQETSSSTAHKGRH*
Ga0131077_105909883	F069035	GGAGG	VFFVEARYHHSPKRAADQVRYIAHREEGLGDGQRRELYGIGPRYRAFRGDEGAIRRALVEDARGLRSPETDRRTADSASSA*